Localized Region Contrast for Enhancing Self-Supervised Learning in Medical Image Segmentation
Auteurs : Xiangyi Yan, Junayed Naushad, Chenyu You, Hao Tang, Shanlin Sun, Kun Han, Haoyu Ma, James Duncan, Xiaohui Xie
Résumé scientifique
Recent advancements in self-supervised learning have demonstrated that effective visual representations can be learned from unlabeled images. This has led to increased interest in applying self-supervised learning to the medical domain, where unlabeled images are abundant and labeled images are difficult to obtain. However, most self-supervised learning approaches are modeled as image level discriminative or generative proxy tasks, which may not capture the finer level representations necessary for dense prediction tasks like multi-organ segmentation. In this paper, we propose a novel contrastive learning framework that integrates Localized Region Contrast (LRC) to enhance existing self-supervised pre-training methods for medical image segmentation. Our approach involves identifying Super-pixels by Felzenszwalb's algorithm and performing local contrastive learning using a novel contrastive sampling loss. Through extensive experiments on three multi-organ segmentation datasets, we demonstrate that integrating LRC to an existing self-supervised method in a limited annotation setting significantly improves segmentation performance. Moreover, we show that LRC can also be applied to fully-supervised pre-training methods to further boost performance.
Les articles autour de lui, par date et par proximité
Plus haut, c’est plus proche de cet article ; à gauche, c’est plus ancien. Les traits relient les articles proches entre eux : les groupes de traits sont des sous-thèmes. Sélectionnez un point pour voir pourquoi il est là. Retour au résumé de cet article
Les articles autour de celui-ci
Classés selon la proximité de leur titre et de leur résumé avec ceux de cet article. Sélectionnez-en pour les lire ensemble.
Les articles les plus proches
-
Customized Segment Anything Model for Medical Image SegmentationKaidong Zhang, Dong Liu · 2023 · Vision par ordinateur et reconnaissance de formes · Résumé IA disponible
Résumé scientifique
We propose SAMed, a general solution for medical image segmentation. Different from the previous methods, SAMed is built upon the large-scale image segmentation model, Segment Anything Model (SAM), to explore the new research paradigm of customizing large-scale models for medical image segmentation. SAMed applies the low-rank-based (LoRA) finetuning strategy to the SAM image encoder and finetunes it together with the prompt encoder and the mask decoder on labeled medical image segmentation datasets. We also observe the warmup finetuning strategy and the AdamW optimizer lead SAMed to successful convergence and lower loss. Different from SAM, SAMed could perform semantic segmentation on medica…
-
Self-Supervised Learning for Cardiac MR Image Segmentation by Anatomical Position PredictionWenjia Bai, Chen Chen, Giacomo Tarroni et al. · 2019 · Vision par ordinateur et reconnaissance de formes · Résumé IA disponible
Résumé scientifique
In the recent years, convolutional neural networks have transformed the field of medical image analysis due to their capacity to learn discriminative image features for a variety of classification and regression tasks. However, successfully learning these features requires a large amount of manually annotated data, which is expensive to acquire and limited by the available resources of expert image analysts. Therefore, unsupervised, weakly-supervised and self-supervised feature learning techniques receive a lot of attention, which aim to utilise the vast amount of available data, while at the same time avoid or substantially reduce the effort of manual annotation. In this paper, we propose a…
-
Dense Contrastive Learning for Self-Supervised Visual Pre-TrainingXinlong Wang, Rufeng Zhang, Chunhua Shen et al. · 2020 · Vision par ordinateur et reconnaissance de formes · Résumé IA disponible
Résumé scientifique
To date, most existing self-supervised learning methods are designed and optimized for image classification. These pre-trained models can be sub-optimal for dense prediction tasks due to the discrepancy between image-level prediction and pixel-level prediction. To fill this gap, we aim to design an effective, dense self-supervised learning method that directly works at the level of pixels (or local features) by taking into account the correspondence between local features. We present dense contrastive learning, which implements self-supervised learning by optimizing a pairwise contrastive (dis)similarity loss at the pixel level between two views of input images. Compared to the baseline meth…
-
Learning Directional Feature Maps for Cardiac MRI SegmentationFeng Cheng, Cheng Chen, Yukang Wang et al. · 2020 · Vision par ordinateur et reconnaissance de formes · Résumé IA disponible
Résumé scientifique
Cardiac MRI segmentation plays a crucial role in clinical diagnosis for evaluating personalized cardiac performance parameters. Due to the indistinct boundaries and heterogeneous intensity distributions in the cardiac MRI, most existing methods still suffer from two aspects of challenges: inter-class indistinction and intra-class inconsistency. To tackle these two problems, we propose a novel method to exploit the directional feature maps, which can simultaneously strengthen the differences between classes and the similarities within classes. Specifically, we perform cardiac segmentation and learn a direction field pointing away from the nearest cardiac tissue boundary to each pixel via a di…
-
Federated Model Aggregation via Self-Supervised Priors for Highly Imbalanced Medical Image ClassificationMarawan Elbatel, Hualiang Wang, Robert Martí et al. · 2023 · Vision par ordinateur et reconnaissance de formes · Résumé IA disponible
Résumé scientifique
In the medical field, federated learning commonly deals with highly imbalanced datasets, including skin lesions and gastrointestinal images. Existing federated methods under highly imbalanced datasets primarily focus on optimizing a global model without incorporating the intra-class variations that can arise in medical imaging due to different populations, findings, and scanners. In this paper, we study the inter-client intra-class variations with publicly available self-supervised auxiliary networks. Specifically, we find that employing a shared auxiliary pre-trained model, like MoCo-V2, locally on every client yields consistent divergence measurements. Based on these findings, we derive a …
-
Robust Semi-Supervised Learning for Histopathology Images through Self-Supervision Guided Out-of-Distribution ScoringNikhil Cherian Kurian, Varsha S, Abhijit Patil et al. · 2023 · Vision par ordinateur et reconnaissance de formes · Résumé IA disponible
Résumé scientifique
Semi-supervised learning (semi-SL) is a promising alternative to supervised learning for medical image analysis when obtaining good quality supervision for medical imaging is difficult. However, semi-SL assumes that the underlying distribution of unaudited data matches that of the few labeled samples, which is often violated in practical settings, particularly in medical images. The presence of out-of-distribution (OOD) samples in the unlabeled training pool of semi-SL is inevitable and can reduce the efficiency of the algorithm. Common preprocessing methods to filter out outlier samples may not be suitable for medical images that involve a wide range of anatomical structures and rare morpho…
-
MeDSLIP: Medical Dual-Stream Language-Image Pre-training for Fine-grained AlignmentWenrui Fan, Mohammod Naimul Islam Suvon, Shuo Zhou et al. · 2024 · Vision par ordinateur et reconnaissance de formes · Résumé IA disponible
Résumé scientifique
Vision-language pre-training (VLP) models have shown significant advancements in the medical domain. Yet, most VLP models align raw reports to images at a very coarse level, without modeling fine-grained relationships between anatomical and pathological concepts outlined in reports and the corresponding semantic counterparts in images. To address this problem, we propose a Medical Dual-Stream Language-Image Pre-training (MeDSLIP) framework. Specifically, MeDSLIP establishes vision-language fine-grained alignments via disentangling visual and textual representations into anatomy-relevant and pathology-relevant streams. Moreover, a novel vision-language Prototypical Contr-astive Learning (Prot…
-
Deep learning and its application to medical image segmentationHolger R. Roth, Chen Shen, Hirohisa Oda et al. · 2018 · Medical Imaging Technology, Volume 36 (2018), Issue 2, p. 63-71 · Résumé IA disponible
Résumé scientifique
One of the most common tasks in medical imaging is semantic segmentation. Achieving this segmentation automatically has been an active area of research, but the task has been proven very challenging due to the large variation of anatomy across different patients. However, recent advances in deep learning have made it possible to significantly improve the performance of image recognition and semantic segmentation methods in the field of computer vision. Due to the data driven approaches of hierarchical feature learning in deep learning frameworks, these advances can be translated to medical images without much difficulty. Several variations of deep convolutional neural networks have been succ…
Aller plus loin
Comment ces articles sont-ils trouvés ?
Nous comparons le titre et le résumé de cet article avec ceux de tous les articles résumés sur ce site, et avec les articles que Semantic Scholar recommande, ceux qu’il cite et ceux qui le citent (pour un article très cité, ses citations les plus récentes et, depuis OpenAlex, les plus citées). Parmi les travaux antérieurs et les suites, les articles qui s’utilisent en profondeur, une méthode qu’il utilise et les suites très citées remontent un peu. Les niveaux (très proche, proche, apparenté) viennent de la similarité des textes, pas d’un jugement de qualité ; * signale un article sans résumé, comparé par son titre. La phrase sous un article est écrite par une IA à partir des deux résumés : vérifiez-la dans les articles. Un article jugé hors sujet par trois lecteurs quitte la liste.
Pour l’instant seulement parmi les articles résumés sur ce site : relancez la recherche pour ajouter les travaux antérieurs, les suites et les recommandations de Semantic Scholar.